Previous Versions
Cell Ranger ARC 2.1.0 (Oct 6, 2025)
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Download for Linux 64-bit (tar.gz)File size: 852 MBmd5sum: 64018a2d04f0573a6e9d5d5ed7932d82curlwgetcurl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1770475717&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ihOE1aZ6wHtv-KiyKpGKzkYraYvmnLoOgVryQwpI5xOGBIJY8oeM7jrhqi9Yf1xKkMFbJP~0PrbNGHropZzDikDh0SuvecC7aydODEVGAHTyYsnrzb9lkUyifYpzRjIgDPq~sUcO-fUnzlcrGyyPlaVteoyMkatN3Gh4nOkOyyw51fUsYVJD-WxVzsSZwxjYIxf9ITVMMBZOpoKzrdxRFrhzsiNQkOVz4IgvWVTeP7o6j8z5UyGhCMUrraEfIgzEuHdE3iOIXwNmgOPjzfO-u~cm28P35MRpTsQ81ndNahHnV7eeXtY4rOCojZojg8WKICT8kdf1cTfx60Ged5SgaQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 607 MBmd5sum: 8a8b495fad481b7da3e23eef8f99d9a4curlwgetcurl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1770475717&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=nCGHxjDCk~EeVEV~snB7Vp3Dj6EFT1pZdqkFFeKHgDwg65CuOykyJsBcK5NgFtbiVc0Y2EUYwaHTDbj2rG~ybvGR6K5f3LrFMCGCYX-p4dWun7pH2r6IHBx1TPk7CsJdm9vnV1PGcb1Atdz7e5csmEdER6OYL8nSChjDGL3mE2-5tg-E~HR569myyKZJy50zql461ausAHF2lfSqbkDklQQBwC-w6~vK1RJA4OtUXXpqUb0fVHFb-rysAu2DPneSFLbJzW0Dlc6euDjvV9Ighfh5b0nbOnUTv7585cRnThTTWZDGpxgS5Nw4KBPQn4gRkfKRKob0jCXXzYM00xukzw__"
Download is unavailable on mobile devices.
Cell Ranger ARC v2.1.0 highlights
- Users can now perform automated cell type annotations using Gene Expression libraries.
- Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
- Strand information is now included in the `fragments.tsv` file.
- Improvements to computational performance.
Cell Ranger ARC 2.0.2 (Aug 18, 2022)
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Download for Linux 64-bit (tar.gz)File size: 699 MBmd5sum: 7303f8ceee7b60113c9a0087268830cdcurlwgetcurl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1770475717&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YScEbLG6OlzdMuS~pLeT81LATYRbhYTuU5r1JUL-sa7WvJ1EMvYtJ-ezEHw1BWAzjmtnsGKcQc-gE4w4PPlUuzTXR6kkJiD67Yza6-NR3BWJBofdmfIvlzDcrJRX0UYZSPwN4IsnHpEJ-ogFiuTOaygTwujrGmPVZaqlewRpGPdz3f1F45FQZuugspInPekf7SRBKli~7aoB5Xw1xP4hX6oucv0z6ImRcHkpH4tcjIMTP0nva5y~cnYf1kWp60LmZWp2KwTvqW3HKTVGuc7EL6t1Rx0zxc0B1wYjwfsIoeY-w7lJKIURdbTEovZ8MunJJNQ8EVDivoFqKJqbfh9EHA__"
Download is unavailable on mobile devices.
Cell Ranger ARC 2.0.2 highlights
- New: 2024-A reference transcriptomes now available for human and mouse
- New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
- Improvements to duplicate marking algorithm
- Improvements to computational performance: ~4x faster, 0.5x disk requirements